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Characterization of the complete chloroplast genome of Liquidambar acalycina Chang  ( SCI-EXPANDED收录)  

文献类型:期刊文献

英文题名:Characterization of the complete chloroplast genome of Liquidambar acalycina Chang

作者:Lai, Jiu-Xin[1] Lin, Fu-Rong[1] Huang, Ping[1] Li, Chang-Hong[1] Zheng, Yong-Qi[1]

第一作者:Lai, Jiu-Xin

通信作者:Zheng, YQ[1]

机构:[1]Chinese Acad Forestry, Res Inst Forestry, State Key Lab Tree Genet & Breeding, Lab Forest Silviculture & Tree Cultivat, Beijing, Peoples R China

年份:2020

卷号:5

期号:2

起止页码:1697-1698

外文期刊名:MITOCHONDRIAL DNA PART B-RESOURCES

收录:;WOS:【SCI-EXPANDED(收录号:WOS:000523749500001)】;

基金:This work was supported by the Laboratory of Forest Silviculture and Tree Cultivation [No. ZDRIF201713] and the China Scholarship Council.

语种:英文

外文关键词:Liquidambar acalycina; chloroplast genome; phylogenetic analysis

摘要:Liquidambar acalycina is a popular tree species with high ornamental and economic values because of the leaf shape and coloration. In this study, chloroplast genome of L.acalycina was assembled using Illumina highlights pair-end sequencing data. The chloroplast genome has a quadripartite structure with 160,433 bp in length. It contains a pair of 26,274 bp inverted repeat (IR) regions, which were separated by large single-copy (LSC: 88,963bp) region and small single-copy (SSC: 18,922 bp) region. A total of 133 genes were annotated, including 88 protein-coding genes (PCGs), 37 tRNAs, and 8 rRNAs. The overall GC content was 36.1%. The phylogenetic analysis revealed that L. acalycina has a close relationship with L. fomosana. This complete chloroplast genome is of great value in the genetic research of L. acalycina.

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