文献类型：期刊文献

英文题名：The complete chloroplast genome of Camellia vietnamensis, an economic shrub producing edible seed oil

作者：Lyu, Tao[1,2] Wang, Yupeng[1,2,3] Hu, Zhikang[1,2] Li, Xinlei[1,2] Li, Jiyuan[1,2] Fan, Zhengqi[1,2] Ye, Ning[3] Yin, Hengfu[1,2]

第一作者：Lyu, Tao

通信作者：Li, XL[1];Yin, HF[1];Li, XL[2];Yin, HF[2]

机构：[1]Chinese Acad Forestry, Res Inst Subtrop, State Key Lab Tree Genet & Breeding, Forestry, Hangzhou 311400, Zhejiang, Peoples R China;[2]Chinese Acad Forestry, Res Inst Subtrop, Key Lab Forest Genet & Breeding, Forestry, Hangzhou 311400, Zhejiang, Peoples R China;[3]Nanjing Forestry Univ, Coll Informat Sci & Technol, Nanjing, Jiangsu, Peoples R China

年份：2019

卷号：4

期号：2

起止页码：3736-3737

外文期刊名：MITOCHONDRIAL DNA PART B-RESOURCES

收录：;WOS:【SCI-EXPANDED(收录号:WOS:000492149200001)】；

基金：This work is supported by Special Fund for Forest Scientific Research in the Public Welfare [201504707].

语种：英文

外文关键词：Camellia; chloroplast; genome sequencing; edible oil; phylogeny

摘要：Camellia vietnamensis is an economic woody plant producing high-value edible oils, which is commonly found and cultivated in south areas of China. To provide genetic information for future genetic research, we have sequenced and assembled the complete chloroplast (cp) genome of C. vietnamensis based on the Illumina Hiseq platform. The total genome size is 161,958?bp in length with 37% GC, which contains a large single copy (LSC, 86,657?bp) region, a small single copy (SSC, 13,347?bp) region, and a pair of inverted repeat (IRs, 30,977?bp) regions. It is comprised of 81 protein-coding genes, 44 transfer RNAs and 4 ribosomal RNAs. To obtain the phylogeny relationship, the cp genome of C. vietnamensis has been compared with other Camellia species; the results indicate that C. vietnamensis is closely related to C. taliensis. This study provides fundamental information of C. vietnamensis cp genome, and it is valuable to the molecular phylogenetic and genetic diversity analyses in future.