文献类型：期刊文献

英文题名：PICEAdatabase: a web database for Picea omics and phenotypic information

作者：Lu, Nan[1] Zhu, Tianqing[1] Ouyang, Fangqun[1] Xia, Yan[2] Li, Qingfen[1] Jia, Zirui[1] Hu, Jiwen[1] Ling, Juanjuan[1] Ma, Wenjun[1] Yang, Guijuan[1] Zhang, Hanguo[3] Kong, Lisheng[4] Wang, Junhui[1]

第一作者：卢楠

通信作者：Wang, JH[1]

机构：[1]Chinese Acad Forestry, State Key Lab Tree Genet & Breeding, Key Lab Tree Breeding & Cultivat, State Forestry Adm,Res Inst Forestry, 1 Dongxiaofu,Xiangshan Rd, Beijing 100091, Peoples R China;[2]Southwest Univ, Coll Hort & Landscape Architecture, Minist Educ, Key Lab Hort Sci Southern Mt Reg, 2 Tiansheng Rd, Chongqing 400715, Peoples R China;[3]Northeast Forestry Univ, State Key Lab Tree Genet & Breeding, 26 Hexing Rd, Harbin 150040, Heilongjiang, Peoples R China;[4]Univ Victoria, Dept Biol, Ctr Forest Biol, 3800 Finnerty Rd, Victoria, BC V8P 5C2, Canada

年份：2019

卷号：2019

外文期刊名：DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION

收录：;WOS:【SCI-EXPANDED(收录号:WOS:000483132900001)】；

基金：Thirteen Five-Year Plan for Key and Research Project of China (2017YFD0600606-09).

语种：英文

摘要：Picea belongs to the Pinaceae family and is a famous commercial tree species because of its straight trunk and excellent timber traits. Recently, omics have been widely used for fundamental and mechanism studies on Picea plants. To improve the accessibility to omics and phenotypic data and facilitate further studies, we compiled the sequences of 2 chloroplast genomes (Picea crassifolia and Picea asperata) and 32 complete omics data sets, including 20 transcriptomes, 4 proteomes, 2 degradomes and 6 microRNAs from P. crassifolia, P. asperata, Picea balfouriana and Picea abies tissues under different treatments, in PICEAdatabase. In addition, phenotypic data on plant growth and wood property traits were collected from two field trials of P. crassifolia. PICEAdatabase also includes useful analysis tools, such as BLAST, DESeq2 and JBrowse, to assist with analyses.