详细信息
Genome-wide identification and characterization of the SPL gene family in Ziziphus jujuba ( SCI-EXPANDED收录) 被引量:31
文献类型:期刊文献
英文题名:Genome-wide identification and characterization of the SPL gene family in Ziziphus jujuba
作者:Shao, Fenjuan[1] Lu, Qiang[1] Wilson, Iain W.[2] Qiu, Deyou[1]
第一作者:邵芬娟
通信作者:Qiu, DY[1]|[a000598d4c276c5f9aea6]邱德有;
机构:[1]Chinese Acad Forestry, Res Inst Forestry, Key Lab Tree Breeding & Cultivat State Forestry A, State Key Lab Tree Genet & Breeding, Beijing 100091, Peoples R China;[2]CSIRO Agr & Food, POB 1600, Canberra, ACT 2601, Australia
年份:2017
卷号:627
起止页码:315-321
外文期刊名:GENE
收录:;WOS:【SCI-EXPANDED(收录号:WOS:000407658000042)】;
基金:This work was supported by the National Key Research & Development Program of China (grant number 2017YFD0600205) and the Basic Research Fund of RIF (grant number RIF2014-01).
语种:英文
外文关键词:SPL; witches'-broom disease; Ziziphus jujuba
摘要:SQUAMOSA Promoter-Binding Protein-Likes (SPLs) are plant specific transcription factors playing important roles in plant growth and development. The SPL gene family has been studied in various plant species; however, there is no report about SPLs in Zizyphus jujuba. In this study, we identified 18 putative ZjSPL genes in Z. jujuba using a genome-wide analysis. Sequence features, gene structures, conserved domains and motifs were analyzed. The phylogenetic relationships of SPLs in Z. jujuba and A. thaliana were revealed. A total of 5 pairs of ZjSPLs were identified, suggesting the importance of gene duplication in SPL gene expansion in Z. jujuba. In addition, 11 of the 18 ZjSPLs, belonging to G1, G2 and G5 subgroups, were found to be targets of miR156, suggesting the conservation of miR156-mediated posttranscriptional regulation in plants. Expression analysis revealed that eight ZjSPL genes were responsive to the infection of witches'-broom phytoplasma. Our results provide a basis for the further elucidation of the biological function of ZjSPLs and their regulation in witches'-broom disease.
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