详细信息
A chromosome-level genome assembly of the gall maker pest inquiline, Diomorus aiolomorphi Kamijo (Hymenoptera: Torymidae) ( SCI-EXPANDED收录)
文献类型:期刊文献
英文题名:A chromosome-level genome assembly of the gall maker pest inquiline, Diomorus aiolomorphi Kamijo (Hymenoptera: Torymidae)
作者:Yuan, Ruizhong[1,2,3,4] Qu, Qiuyu[1,2,3,4,5] Lu, Zhaohe[1,2,3,4] Geng, Xiansheng[6] Tian, Shiji[1,2,3] Jin, Yu[1,2,3] Gong, Jiabao[1,2,3,4] Ye, Xiqian[1,2,3,4] Tang, Pu[1,2,3,4] Chen, Xuexin[1,2,3,4,5]
第一作者:Yuan, Ruizhong
通信作者:Tang, P[1];Chen, XX[1];Tang, P[2];Chen, XX[2];Tang, P[3];Chen, XX[3];Tang, P[4];Chen, XX[4];Chen, XX[5]
机构:[1]Zhejiang Univ, Inst Insect Sci, Coll Agr & Biotechnol, Hangzhou 310058, Peoples R China;[2]Zhejiang Univ, State Key Lab Rice Biol, Key Lab Mol Biol Crop Pathogens & Insects, Minist Agr & Rural Affairs, Hangzhou 310058, Peoples R China;[3]Zhejiang Univ, Zhejiang Prov Key Lab Biol Crop Pathogens & Insect, Hangzhou 310058, Peoples R China;[4]Guangdong Lab Lingnan Modern Agr, Guangzhou 510642, Peoples R China;[5]Zhejiang Univ, Hainan Inst, Sanya 572025, Peoples R China;[6]Chinese Acad Forestry, Res Inst Subtrop Forestry, Hangzhou 311400, Peoples R China
年份:2024
卷号:11
期号:1
外文期刊名:SCIENTIFIC DATA
收录:;WOS:【SCI-EXPANDED(收录号:WOS:001303626100006)】;
基金:This study was supported by the Key International Joint Research Program of National Natural Science Foundation of China (31920103005), the General Program of National Natural Science Foundation of China (32070467), the National Key Research and Development Program of China (2023YFD1400600), the Provincial Key Research and Development Plan of Zhejiang (2021C02045) and the Key Project of Laboratory of Lingnan Modern Agriculture (NT2021003).
语种:英文
摘要:Diomorus aiolomorphi Kamijo (Hymenoptera: Torymidae) is an inquiline of gall maker Aiolomorphus rhopaloides Walker (Hymenoptera: Eurytomidae). They are of significant economic significance and predominantly inhabit bamboo forest. So far, only four scaffold-level genomes have been published for the family Torymidae. In this study, we present a high-quality genome assembly of D. aiolomorphi at the chromosome level, achieved through the integration of Nanopore (ONT) long-read, Illumina pair-end DNA short-read, and High-through Chromosome Conformation Capture (Hi-C) sequencing methods. The final assembly was 1,084.56 Mb in genome size, with 1,083.41 Mb (99.89%) assigned to five pseudochromosomes. The scaffold N50 length reached 224.87 Mb, and the complete Benchmarking Universal Single-Copy Orthologs (BUSCO) score was 97.3%. The genome contained 762.12 Mb of repetitive elements, accounting for 70.27% of the total genome size. A total of 18,011 protein-coding genes were predicted, with 17,829 genes being functionally annotated. The high-quality genome assembly of D. aiolomorphi presented in this study will serve as a valuable genomic resource for future research on parasitoid wasps. The results of this study may also contribute to the development of biological control strategies for pest management in bamboo forests, enhancing ecological balance and economic sustainability.
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