成果/Result
- An efficient approach to finding Siraitia grosvenorii triterpene biosynthetic genes by RNA-seq and digital gene expression analysis被引量：136收藏
- 作者：Tang, Qi[1,3] Ma, Xiaojun[1,3] Mo, Changming[3] Wilson, Iain W.[4] Song, Cai[3]
- 机构：Chinese Acad Med Sci;Chinese Acad Forestry;Chinese Acad Med Sci;CSIRO Plant Ind
- 来源：BMC GENOMICS 2011
- High throughput sequencing technology reveals that the taxoid elicitor methyl jasmonate regulates microRNA expression in Chinese yew (Taxus chinensis)被引量：104收藏
- 作者：Qiu, Deyou[1] Pan, Xiaoping[2] Wilson, Iain W.[3] Li, Fenglan[1,4,5] Liu, Min[1]
- 机构：Chinese Acad Forestry;Western Illinois Univ;CSIRO Plant Ind;Chinese Acad Med Sci;Peking Union Med Univ
- 来源：GENE 2009
- 关键词：MicroRNA Taxus chinensis Illumina sequencing Methyl jasmonate Paclitaxel biosynthesis
- De novo sequencing and a comprehensive analysis of purple sweet potato (Impomoea batatas L.) transcriptome被引量：99收藏
- 作者：Xie, Fuliang[1] Burklew, Caitlin E.[1] Yang, Yanfang[2,3] Liu, Min[4] Xiao, Peng[5]
- 机构：E Carolina Univ;Chinese Acad Forestry;State Key Lab Tree Genet & Breeding;China Agr Univ;E Carolina Univ
- 来源：PLANTA 2012
- 关键词：Anthocyanin Gene expression Microsatellite markers RNA-sequencing Simple sequence repeat (SSR) Sweet potato Transcriptome
- Genome sequencing and analysis of the paclitaxel-producing endophytic fungus Penicillium aurantiogriseum NRRL 62431被引量：96收藏
- 作者：Yang, Yanfang[1] Zhao, Hainan[2] Barrero, Roberto A.[3] Zhang, Baohong[4] Sun, Guiling[5,6]
- 机构：Chinese Acad Forestry;China Agr Univ;Murdoch Univ;E Carolina Univ;Southwest Forestry Univ
- 来源：BMC GENOMICS 2014
- 关键词：Penicillium aurantiogriseum NRRL 62431 Paclitaxel Taxol (TM) Endophytic fungi Genome sequence Horizontal gene transfer
- De novo assembly of Euphorbia fischeriana root transcriptome identifies prostratin pathway related genes被引量：60收藏
- 作者：Barrero, Roberto A.[1] Chapman, Brett[1] Yang, Yanfang[2] Moolhuijzen, Paula[1] Keeble-Gagnere, Gabriel[1]
- 机构：Murdoch Univ;Chinese Acad Forestry;Chinese Acad Med Sci
- 来源：BMC GENOMICS 2011
- De novo transcriptome sequencing and digital gene expression analysis predict biosynthetic pathway of rhynchophylline and isorhynchophylline from Uncaria rhynchophylla, a non-model plant with potent anti-alzheimer's properties被引量：56收藏
- 作者：Guo, Qianqian[1,2] Ma, Xiaojun[3,4] Wei, Shugen[5] Qiu, Deyou[6] Wilson, Iain W.[7]
- 机构：Northeast Agr Univ;Qiqihar Univ;Chinese Acad Med Sci;Chinese Acad Med Sci;Guangxi Med Bot Garden
- 来源：BMC GENOMICS 2014
- 关键词：Transcriptome DGE Uncaria rhynchophylla Rhynchophylline Isorhynchophylline Terpene indole alkaloid biosynthesis
- The genome of Populus alba x Populus tremula var. glandulosa clone 84K被引量：51收藏
- 作者：Qiu, Deyou[1] Bai, Shenglong[2] Ma, Jianchao[2] Zhang, Lisha[1] Shao, Fenjuan[1]
- 机构：Chinese Acad Forestry;Henan Univ;Agr Univ Hebei;Univ Arizona;Univ Arizona
- 来源：DNA RESEARCH 2019
- 关键词：poplar 84K genome sequencing subgenome assignment P. alba P. tremula
- Genomewide analysis of the lateral organ boundaries domain gene family in Eucalyptus grandis reveals members that differentially impact secondary growth被引量：39收藏
- 作者：Lu, Qiang[1] Shao, Fenjuan[1] Macmillan, Colleen[2] Wilson, Iain W.[2] van der Merwe, Karen[3]
- 机构：Chinese Acad Forestry;CSIRO Agr & Food;Univ Pretoria;China Agr Univ;China Agr Univ
- 来源：PLANT BIOTECHNOLOGY JOURNAL 2018
- 关键词：Eucalyptus grandis lateral organ boundaries domain gene expression secondary growth xylem development fibre production
- Identification and characterization of MYC transcription factors in Taxus sp.被引量：33收藏
- 作者：Yang Yanfang[1] Zhang Kaikai[1,2] Yang Liying[2] Lv Xing[2] Wu Ying[2]
- 机构：Chinese Acad Forestry;Agr Univ Hebei;Hebei Acad Sci;Peking Univ
- 来源：GENE 2018
- 关键词：Transcription factor MYC G-box bHLH Taxol Taxus sp.
- Identification of novel and conserved microRNAs in Panax notoginseng roots by high-throughput sequencing被引量：31收藏
- 作者：Wei, Rongchang[1,2,3] Qiu, Deyou[6] Wilson, Iain W.[7] Zhao, Huan[1,2] Lu, Shanfa[1,2]
- 机构：Chinese Acad Med Sci;Peking Union Med Coll;Guangxi Bot Garden Med Plants;Hunan Agr Univ;Hunan Agr Univ
- 来源：BMC GENOMICS 2015
- 关键词：Panax notoginseng MicroRNA High-throughput sequencing qRT-PCR Saponins
- Deep Sequencing Reveals Transcriptome Re-Programming of Taxus x media Cells to the Elicitation with Methyl Jasmonate被引量：28收藏
- 作者：Sun, Guiling[1] Yang, Yanfang[2] Xie, Fuliang[3] Wen, Jian-Fan[4] Wu, Jianqiang[1]
- 机构：Chinese Acad Sci;Chinese Acad Forestry;E Carolina Univ;Chinese Acad Sci;CSIRO Plant Ind
- 来源：PLOS ONE 2013
- The Research Progress of Taxol in Taxus被引量：25收藏
- 作者：Shao, Fenjuan[1] Wilson, Iain W.[2] Qiu, Deyou[1]
- 机构：Chinese Acad Forestry;CSIRO Agr & Food
- 来源：CURRENT PHARMACEUTICAL BIOTECHNOLOGY 2021
- 关键词：Taxus taxol content biosynthesis production endophytic fungi multi-omics
- Genome-wide identification and characterization of the SPL gene family in Ziziphus jujuba被引量：25收藏
- 作者：Shao, Fenjuan[1] Lu, Qiang[1] Wilson, Iain W.[2] Qiu, Deyou[1]
- 机构：Chinese Acad Forestry;CSIRO Agr & Food
- 来源：GENE 2017
- 关键词：SPL witches'-broom disease Ziziphus jujuba
- LC-MS method for detecting prostratin in plant extracts and identification of a high-yielding population of Euphorbia fischeriana被引量：22收藏
- 作者：Tang, Qi[7] Su, Zhiheng[6] Han, Zhentai[5] Ma, Xiaojun[7] Xu, Derong[4]
- 机构：Univ Portland;Tonghua Normal Univ;Daxinganling Forest Grp Co Ltd;Chinese Acad Forestry;Chinese Acad Forestry
- 来源：PHYTOCHEMISTRY LETTERS 2012
- 关键词：Euphorbia fischeriana Steud. Euphorbiaceae LC-MS Prostratin 12-Deoxyphorbal-13-acetate
- Comparative analysis of the Dicer-like gene family reveals loss of miR162 target site in SmDCL1 from Salvia miltiorrhiza被引量：20收藏
- 作者：Shao, Fenjuan[1,2,3] Qiu, Deyou[3] Lu, Shanfa[1,2]
- 机构：Chinese Acad Med Sci;Peking Union Med Coll;Chinese Acad Forestry
- 来源：SCIENTIFIC REPORTS 2015
- Synthesis of Water Soluble Quantum Dots for Monitoring Carrier-DNA Nanoparticles in Plant Cells被引量：19收藏
- 作者：Wang, Qiong[1] Chen, Jienan[1,2] Zhang, Huaiyun[1] Lu, Mengzhu[3] Qiu, Deyou[3]
- 机构：Cent S Univ Forestry & Technol;Transpoints Inc;Chinese Acad Forestry
- 来源：JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY 2011
- 关键词：Quantum Dot L-Cysteine Bio-Labels Nano-Scale Carriers Jatropha Curcas
- A comparative metabolomics analysis of the components of heartwood and sapwood in Taxus chinensis (Pilger) Rehd.被引量：18收藏
- 作者：Shao, Fenjuan[1] Zhang, Lisha[1] Guo, Juan[2] Liu, Xiaochun[3] Ma, Wenhui[4]
- 机构：Chinese Acad Forestry;Chinese Acad Forestry;Gansu Forestry & Grassland Adm;Liangdang Forestry Adm;CSIRO Agr & Food
- 来源：SCIENTIFIC REPORTS 2019
- Transcriptome-wide analysis of AP2/ERF transcription factors involved in regulating Taxol biosynthesis in Taxus x media被引量：17收藏
- 作者：Zhang, Kaikai[1,2] Jiang, Luyuan[1,2] Wang, Xu[3] Han, Hua[4] Chen, Duanfen[2]
- 机构：Chinese Acad Forestry;Hebei Agr Univ;Hebei Normal Univ Sci & Technol;Chinese Acad Forestry
- 来源：INDUSTRIAL CROPS AND PRODUCTS 2021
- 关键词：Taxus B5 subgroup Gene expression Bioinformatic analysis Taxol
- Molecular cloning and characterization of a cytochrome P450 taxoid 9a-hydroxylase in Ginkgo biloba cells被引量：17收藏
- 作者：Zhang, Nan[1] Han, Zhentai[2] Sun, Guiling[3] Hoffman, Angela[4] Wilson, Iain W.[5]
- 机构：Chinese Acad Forestry;Chinese Acad Forestry;Chinese Acad Sci;Univ Portland;CSIRO Plant Ind
- 来源：BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 2014
- 关键词：Taxol Taxoid 9 alpha-hydroxylase Ginkgo biloba CYP450 Cell-free protein synthesis system LC-MS
- Genome-Wide Identification and Analysis of MicroRNAs Involved in Witches'-Broom Phytoplasma Response in Ziziphus jujuba被引量：16收藏
- 作者：Shao, Fenjuan[1] Zhang, Qian[1] Liu, Hongwei[1] Lu, Shanfa[2,3] Qiu, Deyou[1]
- 机构：Chinese Acad Forestry;Chinese Acad Med Sci;Peking Union Med Coll
- 来源：PLOS ONE 2016
- Transcriptomic Analysis of Betula halophila in Response to Salt Stress被引量：16收藏
- 作者：Shao, Fenjuan[1] Zhang, Lisha[1] Wilson, Iain W.[2] Qiu, Deyou[1]
- 机构：Chinese Acad Forestry;CSIRO Agr & Food
- 来源：INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 2018
- 关键词：Betula halophile salt stress transcriptomes
- Baseline Survey of Root-Associated Microbes of Taxus chinensis (Pilger) Rehd被引量：14收藏
- 作者：Zhang, Qian[1] Liu, Hongwei[1] Sun, Guiling[2] Wilson, Iain W.[3] Wu, Jianqiang[2]
- 机构：Chinese Acad Forestry;Chinese Acad Sci;CSIRO;Univ Portland;Zhejiang Forestry Acad
- 来源：PLOS ONE 2015
- Whole transcriptome analysis of three leaf stages in two cultivars and one of their F-1 hybrid of Camellia sinensis L. with differing EGCG content被引量：12收藏
- 作者：Lin, Jinke[1] Wilson, Iain W.[2] Ge, Guoping[1,3] Sun, Guiling[4] Xie, Fuliang[5]
- 机构：Fujian Agr & Forestry Univ;CSIRO Agr & Food;Agr Extens Serv Ctr;Chinese Acad Sci;East Carolina Univ
- 来源：TREE GENETICS & GENOMES 2017
- 关键词：Camellia sinensis Tea plant Transcriptome Leaf Epigallocatechin-3-gallate Gene Expression regulation
- Antisense-induced suppression of taxoid 14 beta-hydroxylase gene expression in transgenic Taxus x media cells被引量：10收藏
- 作者：Li, Feng-Lan[1,2] Ma, Xiao-Jun[1,2] Hu, Xin-Ling[3] Hoffman, Angela[4] Dai, Jun-Gui[5,6]
- 机构：Chinese Acad Med Sci;Peking Union Med Univ;Chinese Acad Forestry;Univ Portland;Chinese Acad Med Sci
- 来源：AFRICAN JOURNAL OF BIOTECHNOLOGY 2011
- 关键词：Taxus x media taxoid 14 beta-hydroxylase antisense gene suppression
- Identification of the Genes Involved in Anthocyanin Biosynthesis and Accumulation in Taxus chinensis被引量：10收藏
- 作者：Zhang, Lisha[1,2] Sun, Xiaomei[1,2] Wilson, Iain W.[3] Shao, Fenjuan[1,2] Qiu, Deyou[1,2]
- 机构：Chinese Acad Forestry;Chinese Acad Forestry;CSIRO Agr & Food
- 来源：GENES 2019
- 关键词：anthocyanins Taxus chinensis gymnosperm
- Selection and validation of reference genes for quantitative gene expression normalization in Taxus spp.被引量：9收藏
- 作者：Zhang, Kaikai[1,2] Fan, Wei[3] Chen, Duanfen[2] Jiang, Luyuan[1,2] Li, Yunfeng[4]
- 机构：Chinese Acad Forestry;Agr Univ Hebei;Chinese Acad Forestry;South China Agr Univ
- 来源：SCIENTIFIC REPORTS 2020
- The R2R3-MYB transcription factor family in Taxus chinensis: identification, characterization, expression profiling and posttranscriptional regulation analysis被引量：8收藏
- 作者：Hu, Xinling[1,2] Zhang, Lisha[1] Wilson, Iain[3] Shao, Fenjuan[1] Qiu, Deyou[1]
- 机构：Chinese Acad Forestry;Chinese Acad Sci;CSIRO
- 来源：PEERJ 2020
- 关键词：MYB Transcription factor Taxus chinensis
- Characterization and expression analysis of genes encoding Taxol biosynthetic enzymes in Taxus spp.被引量：7收藏
- 作者：Jiang, Luyuan[1,2] Zhang, Kaikai[1] Lu, Xing[3] Yang, Liying[2] Wang, Shuai[4]
- 机构：Chinese Acad Forestry;Hebei Agr Univ;Hebei Agr Univ;Liaocheng Univ
- 来源：JOURNAL OF FORESTRY RESEARCH 2021
- 关键词：Gene expression Bioinformatics analysis Acyltransferase Cytochrome P450 Abiotic stress Hormone
- Optimization of Isolation and Transformation of Protoplasts from Uncaria rhynchophylla and Its Application to Transient Gene Expression Analysis被引量：6收藏
- 作者：Shao, Yingying[1] Mu, Detian[1] Pan, Limei[2] Wilson, Iain W.[3] Zheng, Yajie[1]
- 机构：Hunan Agr Univ;Guangxi Bot Garden Med Plants;CSIRO Agr & Food;Chinese Acad Forestry
- 来源：INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 2023
- 关键词：Uncaria rhynchophylla protoplast isolation PEG-mediated transfection subcellular localization dual-luciferase (Dual-LUC) assays
- Transcriptome analysis identifies novel responses and potential regulatory genes involved in 12-deoxyphorbol-13-phenylacetate biosynthesis of Euphorbia resinifera被引量：5收藏
- 作者：Zhang, Kaikai[1,2] Fan, Wei[3] Huang, Zhongwen[4] Chen, Duanfen[2] Yao, Zhiwang[2]
- 机构：Chinese Acad Forestry;Agr Univ Hebei;Chinese Acad Forestry;Henan Inst Sci & Technol
- 来源：INDUSTRIAL CROPS AND PRODUCTS 2019
- 关键词：Euphorbia resinifera DPP Transcriptome Casbene synthase Gene expression
